Krypton in PDB 9qm5: Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
Enzymatic activity of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
All present enzymatic activity of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment:
2.8.4.1;
Protein crystallography data
The structure of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment, PDB code: 9qm5
was solved by
M.-C.Mueller,
T.Wagner,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
54.30 /
1.80
|
|
Space group
|
P 21 21 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
153.478,
153.673,
212.885,
90,
90,
90
|
|
R / Rfree (%)
|
12.9 /
15.5
|
Other elements in 9qm5:
The structure of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment also contains other interesting chemical elements:
Krypton Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
38;
Binding sites:
The binding sites of Krypton atom in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
(pdb code 9qm5). This binding sites where shown within
5.0 Angstroms radius around Krypton atom.
In total 38 binding sites of Krypton where determined in the
Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment, PDB code: 9qm5:
Jump to Krypton binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Krypton binding site 1 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 1 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 1 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Kr601
b:30.1
occ:0.59
|
HA
|
A:ALA426
|
2.9
|
25.8
|
1.0
|
|
HE1
|
A:TYR360
|
3.0
|
29.2
|
1.0
|
|
HD23
|
A:LEU364
|
3.1
|
34.3
|
1.0
|
|
O
|
A:HOH986
|
3.1
|
30.8
|
1.0
|
|
HG
|
A:LEU364
|
3.1
|
31.4
|
1.0
|
|
HB3
|
A:ALA363
|
3.2
|
29.0
|
1.0
|
|
HD1
|
A:TYR360
|
3.2
|
28.8
|
1.0
|
|
HA
|
A:ASP370
|
3.3
|
30.0
|
1.0
|
|
HG22
|
A:ILE425
|
3.3
|
28.4
|
1.0
|
|
HB1
|
A:ALA363
|
3.4
|
29.0
|
1.0
|
|
HD21
|
A:LEU364
|
3.5
|
34.3
|
1.0
|
|
CE1
|
A:TYR360
|
3.6
|
24.3
|
1.0
|
|
CD2
|
A:LEU364
|
3.6
|
28.5
|
1.0
|
|
O
|
A:GLY368
|
3.6
|
24.8
|
1.0
|
|
HB2
|
A:ALA426
|
3.7
|
26.0
|
1.0
|
|
HA
|
A:LEU364
|
3.7
|
28.1
|
1.0
|
|
CD1
|
A:TYR360
|
3.7
|
23.9
|
1.0
|
|
CA
|
A:ALA426
|
3.8
|
21.5
|
1.0
|
|
CB
|
A:ALA363
|
3.8
|
24.2
|
1.0
|
|
CG
|
A:LEU364
|
3.8
|
26.2
|
1.0
|
|
N
|
A:LEU364
|
4.0
|
24.5
|
1.0
|
|
N
|
A:ASP370
|
4.0
|
28.7
|
1.0
|
|
H
|
A:LEU364
|
4.0
|
29.4
|
1.0
|
|
CA
|
A:ASP370
|
4.1
|
25.0
|
1.0
|
|
CB
|
A:ALA426
|
4.1
|
21.7
|
1.0
|
|
HB1
|
A:ALA426
|
4.2
|
26.0
|
1.0
|
|
C
|
A:ASP369
|
4.2
|
26.9
|
1.0
|
|
O
|
A:TYR360
|
4.2
|
23.2
|
1.0
|
|
CG2
|
A:ILE425
|
4.2
|
23.6
|
1.0
|
|
OD1
|
A:ASP370
|
4.2
|
25.8
|
1.0
|
|
N
|
A:ALA426
|
4.2
|
21.7
|
1.0
|
|
C
|
A:ALA363
|
4.2
|
26.2
|
1.0
|
|
CA
|
A:LEU364
|
4.2
|
23.4
|
1.0
|
|
H
|
A:ASP370
|
4.3
|
34.4
|
1.0
|
|
O
|
A:ASP369
|
4.3
|
24.6
|
1.0
|
|
H
|
A:GLY371
|
4.3
|
31.1
|
1.0
|
|
HG21
|
A:ILE425
|
4.3
|
28.4
|
1.0
|
|
O
|
A:ILE425
|
4.4
|
21.8
|
1.0
|
|
C
|
A:ILE425
|
4.5
|
20.8
|
1.0
|
|
HA
|
A:TYR360
|
4.5
|
26.6
|
1.0
|
|
HB2
|
A:ALA363
|
4.5
|
29.0
|
1.0
|
|
HD22
|
A:LEU364
|
4.6
|
34.3
|
1.0
|
|
HA
|
A:ASP369
|
4.6
|
32.3
|
1.0
|
|
CB
|
A:LEU364
|
4.6
|
27.3
|
1.0
|
|
O
|
A:ALA363
|
4.7
|
25.1
|
1.0
|
|
CA
|
A:ALA363
|
4.7
|
26.7
|
1.0
|
|
H
|
A:ALA426
|
4.7
|
26.1
|
1.0
|
|
HG23
|
A:ILE425
|
4.7
|
28.4
|
1.0
|
|
C
|
A:GLY368
|
4.8
|
25.1
|
1.0
|
|
HH
|
A:TYR360
|
4.8
|
31.3
|
1.0
|
|
CZ
|
A:TYR360
|
4.8
|
25.7
|
1.0
|
|
C
|
A:ALA426
|
4.9
|
21.1
|
1.0
|
|
CA
|
A:ASP369
|
4.9
|
26.9
|
1.0
|
|
N
|
A:GLY371
|
4.9
|
25.9
|
1.0
|
|
HD11
|
A:LEU364
|
4.9
|
38.8
|
1.0
|
|
HB
|
A:ILE425
|
4.9
|
23.9
|
1.0
|
|
O
|
A:ALA426
|
5.0
|
22.6
|
1.0
|
|
C
|
A:ASP370
|
5.0
|
27.1
|
1.0
|
|
Krypton binding site 2 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 2 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 2 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Kr602
b:46.7
occ:0.45
|
O
|
A:HOH951
|
1.6
|
30.2
|
0.5
|
|
HB2
|
A:ALA120
|
2.7
|
34.7
|
1.0
|
|
HB2
|
A:ALA264
|
2.9
|
27.9
|
1.0
|
|
HG21
|
A:ILE240
|
3.2
|
25.0
|
1.0
|
|
HE2
|
A:PHE244
|
3.3
|
30.6
|
1.0
|
|
HA
|
A:ALA264
|
3.4
|
30.9
|
1.0
|
|
HB3
|
A:ALA263
|
3.4
|
30.7
|
1.0
|
|
HG12
|
A:VAL115
|
3.6
|
29.8
|
1.0
|
|
CB
|
A:ALA120
|
3.7
|
28.9
|
1.0
|
|
O
|
A:GLY116
|
3.7
|
26.0
|
1.0
|
|
CB
|
A:ALA264
|
3.7
|
23.3
|
1.0
|
|
O
|
A:HOH743
|
3.7
|
35.6
|
1.0
|
|
N
|
A:ALA264
|
3.7
|
25.3
|
1.0
|
|
HG11
|
A:VAL115
|
3.7
|
29.8
|
1.0
|
|
CA
|
A:ALA264
|
3.8
|
25.7
|
1.0
|
|
H
|
A:ALA264
|
3.8
|
30.4
|
1.0
|
|
HB1
|
A:ALA263
|
3.9
|
30.7
|
1.0
|
|
O
|
A:LEU260
|
3.9
|
23.8
|
1.0
|
|
HB3
|
A:ALA120
|
3.9
|
34.7
|
1.0
|
|
CG2
|
A:ILE240
|
4.0
|
20.8
|
1.0
|
|
HB1
|
A:ALA120
|
4.0
|
34.7
|
1.0
|
|
HG22
|
A:ILE240
|
4.0
|
25.0
|
1.0
|
|
CB
|
A:ALA263
|
4.1
|
25.6
|
1.0
|
|
CG1
|
A:VAL115
|
4.1
|
24.8
|
1.0
|
|
HB1
|
A:ALA264
|
4.1
|
27.9
|
1.0
|
|
CE2
|
A:PHE244
|
4.2
|
25.5
|
1.0
|
|
HE22
|
A:GLN215
|
4.2
|
37.5
|
1.0
|
|
C
|
A:ALA263
|
4.2
|
24.1
|
1.0
|
|
HG23
|
A:ILE240
|
4.2
|
25.0
|
1.0
|
|
HD13
|
A:ILE240
|
4.2
|
29.0
|
1.0
|
|
HA
|
A:MET117
|
4.3
|
34.8
|
1.0
|
|
HG13
|
A:VAL115
|
4.3
|
29.8
|
1.0
|
|
HB3
|
A:ALA264
|
4.4
|
27.9
|
1.0
|
|
HE21
|
A:GLN215
|
4.4
|
37.5
|
1.0
|
|
H
|
A:ALA120
|
4.4
|
32.8
|
1.0
|
|
HA
|
A:LEU260
|
4.4
|
29.6
|
1.0
|
|
HB3
|
A:ALA268
|
4.5
|
34.1
|
1.0
|
|
HB3
|
A:LEU260
|
4.5
|
32.0
|
1.0
|
|
HD22
|
A:LEU260
|
4.6
|
35.5
|
1.0
|
|
NE2
|
A:GLN215
|
4.7
|
31.2
|
1.0
|
|
O
|
A:ALA263
|
4.7
|
24.3
|
1.0
|
|
CA
|
A:ALA120
|
4.7
|
27.5
|
1.0
|
|
HD2
|
A:PHE244
|
4.8
|
31.2
|
1.0
|
|
HA
|
A:ALA120
|
4.8
|
33.0
|
1.0
|
|
HZ
|
A:PHE244
|
4.8
|
33.5
|
1.0
|
|
CA
|
A:ALA263
|
4.8
|
22.0
|
1.0
|
|
N
|
A:ALA120
|
4.8
|
27.3
|
1.0
|
|
C
|
A:LEU260
|
4.8
|
23.8
|
1.0
|
|
HB2
|
A:ALA263
|
4.9
|
30.7
|
1.0
|
|
C
|
A:GLY116
|
4.9
|
26.7
|
1.0
|
|
CD2
|
A:PHE244
|
4.9
|
26.0
|
1.0
|
|
CZ
|
A:PHE244
|
4.9
|
27.9
|
1.0
|
|
Krypton binding site 3 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 3 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 3 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Kr603
b:27.8
occ:0.45
|
HE1
|
C:PHE101
|
2.8
|
31.2
|
1.0
|
|
HG2
|
A:LYS445
|
3.0
|
25.0
|
1.0
|
|
HA2
|
A:GLY449
|
3.1
|
26.0
|
1.0
|
|
HB2
|
C:TYR100
|
3.1
|
27.0
|
1.0
|
|
OE1
|
A:GLU446
|
3.2
|
26.9
|
1.0
|
|
HA
|
A:GLU446
|
3.3
|
24.1
|
1.0
|
|
HE2
|
A:LYS445
|
3.3
|
26.9
|
1.0
|
|
HE2
|
B:LYS338
|
3.3
|
27.9
|
1.0
|
|
OE2
|
A:GLU446
|
3.4
|
24.3
|
1.0
|
|
HB3
|
C:TYR100
|
3.5
|
27.0
|
1.0
|
|
CE1
|
C:PHE101
|
3.5
|
26.0
|
1.0
|
|
HE2
|
C:TYR104
|
3.5
|
25.0
|
1.0
|
|
HZ1
|
B:LYS338
|
3.5
|
27.9
|
1.0
|
|
CD
|
A:GLU446
|
3.5
|
24.7
|
1.0
|
|
OH
|
C:TYR104
|
3.6
|
22.9
|
1.0
|
|
O
|
A:LYS445
|
3.6
|
20.3
|
1.0
|
|
HE3
|
A:LYS445
|
3.7
|
26.9
|
1.0
|
|
CB
|
C:TYR100
|
3.7
|
22.4
|
1.0
|
|
HD2
|
C:TYR100
|
3.7
|
23.8
|
1.0
|
|
HE3
|
B:LYS338
|
3.8
|
27.9
|
1.0
|
|
HG3
|
A:LYS445
|
3.8
|
25.0
|
1.0
|
|
CG
|
A:LYS445
|
3.8
|
20.8
|
1.0
|
|
CE
|
A:LYS445
|
3.9
|
22.4
|
1.0
|
|
CE
|
B:LYS338
|
3.9
|
23.3
|
1.0
|
|
CG
|
C:TYR100
|
4.0
|
21.2
|
1.0
|
|
CA
|
A:GLY449
|
4.0
|
21.6
|
1.0
|
|
CD2
|
C:TYR100
|
4.1
|
19.8
|
1.0
|
|
HD1
|
C:PHE101
|
4.1
|
27.7
|
1.0
|
|
NZ
|
B:LYS338
|
4.1
|
23.2
|
1.0
|
|
HH
|
C:TYR104
|
4.2
|
27.5
|
1.0
|
|
CA
|
A:GLU446
|
4.2
|
20.0
|
1.0
|
|
CD1
|
C:PHE101
|
4.2
|
23.1
|
1.0
|
|
C
|
A:LYS445
|
4.2
|
21.3
|
1.0
|
|
CE2
|
C:TYR104
|
4.2
|
20.8
|
1.0
|
|
HH
|
C:TYR8
|
4.3
|
29.3
|
1.0
|
|
HZ
|
C:PHE101
|
4.3
|
28.0
|
1.0
|
|
CZ
|
C:PHE101
|
4.3
|
23.3
|
1.0
|
|
CZ
|
C:TYR104
|
4.4
|
22.4
|
1.0
|
|
HA3
|
A:GLY449
|
4.4
|
26.0
|
1.0
|
|
H
|
A:GLY449
|
4.5
|
25.8
|
1.0
|
|
CD
|
A:LYS445
|
4.5
|
20.0
|
1.0
|
|
N
|
A:GLU446
|
4.5
|
19.5
|
1.0
|
|
HZ3
|
B:LYS338
|
4.5
|
27.9
|
1.0
|
|
HH12
|
C:ARG18
|
4.6
|
26.8
|
1.0
|
|
C
|
A:GLY449
|
4.7
|
19.8
|
1.0
|
|
CG
|
A:GLU446
|
4.8
|
24.9
|
1.0
|
|
N
|
A:GLY449
|
4.8
|
21.4
|
1.0
|
|
HZ2
|
B:LYS338
|
4.8
|
27.9
|
1.0
|
|
HE1
|
C:TYR8
|
4.9
|
25.2
|
1.0
|
|
NH1
|
C:ARG18
|
4.9
|
22.3
|
1.0
|
|
HD3
|
A:LYS445
|
5.0
|
24.0
|
1.0
|
|
CB
|
A:GLU446
|
5.0
|
20.4
|
1.0
|
|
CB
|
A:LYS445
|
5.0
|
21.1
|
1.0
|
|
Krypton binding site 4 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 4 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 4 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Kr604
b:23.9
occ:0.42
|
HZ3
|
A:TRP106
|
2.9
|
24.9
|
1.0
|
|
HH2
|
A:TRP106
|
3.0
|
26.4
|
1.0
|
|
HB2
|
A:ALA273
|
3.1
|
25.4
|
1.0
|
|
HD13
|
A:LEU290
|
3.1
|
25.4
|
1.0
|
|
HB2
|
A:MET272
|
3.1
|
24.5
|
1.0
|
|
HB3
|
A:MET272
|
3.2
|
24.5
|
1.0
|
|
HB2
|
A:LEU290
|
3.2
|
22.7
|
1.0
|
|
HB3
|
A:ALA273
|
3.4
|
25.4
|
1.0
|
|
HA
|
A:ASN285
|
3.4
|
24.5
|
1.0
|
|
CZ3
|
A:TRP106
|
3.5
|
20.8
|
1.0
|
|
CH2
|
A:TRP106
|
3.6
|
22.0
|
1.0
|
|
CB
|
A:MET272
|
3.6
|
20.4
|
1.0
|
|
CB
|
A:ALA273
|
3.7
|
21.1
|
1.0
|
|
O
|
A:GLU286
|
3.7
|
19.1
|
1.0
|
|
HD22
|
A:LEU290
|
3.7
|
26.4
|
1.0
|
|
C
|
A:ASN285
|
3.9
|
21.5
|
1.0
|
|
HA
|
A:PRO287
|
3.9
|
24.4
|
1.0
|
|
C
|
A:GLU286
|
4.0
|
19.2
|
1.0
|
|
CD1
|
A:LEU290
|
4.0
|
21.2
|
1.0
|
|
N
|
A:GLU286
|
4.0
|
19.9
|
1.0
|
|
HE1
|
A:MET298
|
4.1
|
32.9
|
1.0
|
|
HB3
|
A:MET109
|
4.1
|
24.3
|
1.0
|
|
O
|
A:ASN285
|
4.1
|
20.2
|
1.0
|
|
CA
|
A:ASN285
|
4.1
|
20.4
|
1.0
|
|
CB
|
A:LEU290
|
4.1
|
18.9
|
1.0
|
|
C
|
A:MET272
|
4.2
|
22.2
|
1.0
|
|
O
|
A:MET272
|
4.3
|
20.5
|
1.0
|
|
HB1
|
A:ALA273
|
4.3
|
25.4
|
1.0
|
|
H
|
A:GLU286
|
4.3
|
23.9
|
1.0
|
|
HA
|
A:GLU286
|
4.3
|
24.6
|
1.0
|
|
HD12
|
A:LEU290
|
4.4
|
25.4
|
1.0
|
|
HA
|
A:LYS110
|
4.4
|
25.6
|
1.0
|
|
CA
|
A:GLU286
|
4.4
|
20.4
|
1.0
|
|
N
|
A:ALA273
|
4.4
|
20.7
|
1.0
|
|
CG
|
A:LEU290
|
4.5
|
20.4
|
1.0
|
|
HG3
|
A:MET272
|
4.5
|
23.7
|
1.0
|
|
CD2
|
A:LEU290
|
4.5
|
22.0
|
1.0
|
|
CA
|
A:MET272
|
4.6
|
19.3
|
1.0
|
|
N
|
A:PRO287
|
4.6
|
18.4
|
1.0
|
|
HA
|
A:LEU290
|
4.6
|
21.6
|
1.0
|
|
HD11
|
A:LEU290
|
4.6
|
25.4
|
1.0
|
|
CA
|
A:PRO287
|
4.7
|
20.3
|
1.0
|
|
CA
|
A:ALA273
|
4.7
|
22.4
|
1.0
|
|
CG
|
A:MET272
|
4.7
|
19.7
|
1.0
|
|
HB3
|
A:LEU290
|
4.7
|
22.7
|
1.0
|
|
H
|
A:ALA273
|
4.8
|
24.8
|
1.0
|
|
CE3
|
A:TRP106
|
4.9
|
20.8
|
1.0
|
|
HB3
|
A:ASN285
|
4.9
|
22.7
|
1.0
|
|
CA
|
A:LEU290
|
4.9
|
17.9
|
1.0
|
|
CZ2
|
A:TRP106
|
4.9
|
20.3
|
1.0
|
|
CB
|
A:ASN285
|
4.9
|
18.9
|
1.0
|
|
CB
|
A:MET109
|
5.0
|
20.2
|
1.0
|
|
CG
|
A:ASN285
|
5.0
|
20.6
|
1.0
|
|
Krypton binding site 5 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 5 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 5 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Kr605
b:32.5
occ:0.30
|
HH21
|
A:ARG545
|
2.7
|
45.3
|
1.0
|
|
O
|
A:HOH820
|
2.8
|
31.2
|
0.7
|
|
HB3
|
A:ASN98
|
2.9
|
20.6
|
1.0
|
|
HZ
|
A:PHE45
|
3.0
|
26.8
|
1.0
|
|
HD2
|
A:ARG41
|
3.2
|
28.9
|
1.0
|
|
HE1
|
A:PHE45
|
3.3
|
27.4
|
1.0
|
|
NH2
|
A:ARG545
|
3.5
|
37.7
|
1.0
|
|
OD1
|
A:ASP93
|
3.5
|
23.6
|
1.0
|
|
HD2
|
D:HIS162
|
3.5
|
28.9
|
1.0
|
|
HB2
|
D:HIS162
|
3.5
|
25.8
|
1.0
|
|
HA
|
A:ASP93
|
3.6
|
22.7
|
1.0
|
|
HE
|
A:ARG41
|
3.6
|
32.9
|
1.0
|
|
HD22
|
A:ASN98
|
3.7
|
23.5
|
1.0
|
|
CB
|
A:ASN98
|
3.7
|
17.1
|
1.0
|
|
CZ
|
A:PHE45
|
3.8
|
22.3
|
1.0
|
|
HH22
|
A:ARG545
|
3.8
|
45.3
|
1.0
|
|
CG
|
A:ASN98
|
3.8
|
19.4
|
1.0
|
|
ND2
|
A:ASN98
|
3.8
|
19.6
|
1.0
|
|
CE1
|
A:PHE45
|
3.9
|
22.9
|
1.0
|
|
CD
|
A:ARG41
|
4.0
|
24.1
|
1.0
|
|
HE
|
A:ARG545
|
4.0
|
35.8
|
1.0
|
|
HB2
|
A:ASN98
|
4.1
|
20.6
|
1.0
|
|
HB2
|
A:ASP92
|
4.1
|
24.1
|
1.0
|
|
HG12
|
D:VAL556
|
4.1
|
25.1
|
1.0
|
|
NE
|
A:ARG41
|
4.1
|
27.4
|
1.0
|
|
HG11
|
D:VAL556
|
4.1
|
25.1
|
1.0
|
|
HD21
|
A:ASN98
|
4.2
|
23.5
|
1.0
|
|
O
|
A:ASP92
|
4.2
|
19.2
|
1.0
|
|
CD2
|
D:HIS162
|
4.2
|
24.1
|
1.0
|
|
O
|
A:HOH882
|
4.3
|
24.6
|
1.0
|
|
CB
|
D:HIS162
|
4.4
|
21.5
|
1.0
|
|
CZ
|
A:ARG545
|
4.4
|
33.5
|
1.0
|
|
OD1
|
A:ASN98
|
4.4
|
18.6
|
1.0
|
|
C
|
A:ASP92
|
4.4
|
19.0
|
1.0
|
|
CA
|
A:ASP93
|
4.4
|
18.9
|
1.0
|
|
HB3
|
A:ASP92
|
4.5
|
24.1
|
1.0
|
|
N
|
A:ASP93
|
4.5
|
18.7
|
1.0
|
|
NE
|
A:ARG545
|
4.6
|
29.8
|
1.0
|
|
HG2
|
A:ARG41
|
4.6
|
29.4
|
1.0
|
|
CG1
|
D:VAL556
|
4.6
|
20.9
|
1.0
|
|
CG
|
A:ASP93
|
4.6
|
25.9
|
1.0
|
|
HD3
|
A:ARG41
|
4.6
|
28.9
|
1.0
|
|
CG
|
D:HIS162
|
4.7
|
21.2
|
1.0
|
|
CB
|
A:ASP92
|
4.7
|
20.0
|
1.0
|
|
CG
|
A:ARG41
|
4.8
|
24.4
|
1.0
|
|
O
|
A:HOH712
|
4.8
|
30.9
|
1.0
|
|
O
|
A:ASN98
|
4.8
|
20.2
|
1.0
|
|
HG3
|
A:ARG41
|
4.8
|
29.4
|
1.0
|
|
CA
|
A:ASN98
|
4.9
|
17.5
|
1.0
|
|
HA
|
A:ASN98
|
4.9
|
21.0
|
1.0
|
|
H
|
A:ASP93
|
4.9
|
22.5
|
1.0
|
|
HB3
|
D:HIS162
|
4.9
|
25.8
|
1.0
|
|
H
|
D:HIS162
|
5.0
|
23.4
|
1.0
|
|
Krypton binding site 6 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 6 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 6 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Kr606
b:25.0
occ:0.12
|
HB2
|
A:MET439
|
2.8
|
23.8
|
1.0
|
|
HB3
|
A:ALA380
|
2.8
|
27.4
|
1.0
|
|
HB1
|
A:ALA380
|
2.9
|
27.4
|
1.0
|
|
HE2
|
A:MET439
|
2.9
|
28.1
|
1.0
|
|
HA
|
A:THR381
|
3.0
|
27.4
|
1.0
|
|
HD12
|
A:LEU377
|
3.2
|
27.5
|
1.0
|
|
HA
|
A:ALA436
|
3.2
|
22.9
|
1.0
|
|
HB3
|
A:SER435
|
3.2
|
26.4
|
1.0
|
|
CB
|
A:ALA380
|
3.3
|
22.8
|
1.0
|
|
N
|
A:THR381
|
3.3
|
23.3
|
1.0
|
|
HG1
|
A:THR381
|
3.3
|
26.7
|
1.0
|
|
OG1
|
A:THR381
|
3.4
|
22.2
|
1.0
|
|
C
|
A:ALA380
|
3.4
|
23.9
|
1.0
|
|
HE1
|
C:HIS237
|
3.4
|
28.9
|
1.0
|
|
O
|
A:SER435
|
3.5
|
20.6
|
1.0
|
|
H
|
A:THR381
|
3.5
|
28.0
|
1.0
|
|
HG2
|
A:MET439
|
3.5
|
26.4
|
1.0
|
|
CE1
|
C:HIS237
|
3.5
|
24.1
|
1.0
|
|
CA
|
A:THR381
|
3.6
|
22.8
|
1.0
|
|
CB
|
A:MET439
|
3.6
|
19.8
|
1.0
|
|
HB3
|
A:MET439
|
3.7
|
23.8
|
1.0
|
|
HE3
|
A:MET439
|
3.7
|
28.1
|
1.0
|
|
O
|
A:ALA380
|
3.7
|
21.5
|
1.0
|
|
CE
|
A:MET439
|
3.7
|
23.4
|
1.0
|
|
C
|
A:SER435
|
3.7
|
20.6
|
1.0
|
|
HD11
|
A:LEU377
|
3.7
|
27.5
|
1.0
|
|
NE2
|
C:HIS237
|
3.8
|
21.2
|
1.0
|
|
HE2
|
C:HIS237
|
3.8
|
25.4
|
1.0
|
|
CD1
|
A:LEU377
|
3.9
|
22.9
|
1.0
|
|
CA
|
A:ALA380
|
3.9
|
22.8
|
1.0
|
|
O
|
A:LEU377
|
3.9
|
22.7
|
1.0
|
|
N
|
A:ALA436
|
4.0
|
19.7
|
1.0
|
|
CG
|
A:MET439
|
4.0
|
22.0
|
1.0
|
|
CA
|
A:ALA436
|
4.0
|
19.1
|
1.0
|
|
CB
|
A:SER435
|
4.0
|
22.0
|
1.0
|
|
HB2
|
A:ALA380
|
4.1
|
27.4
|
1.0
|
|
CB
|
A:THR381
|
4.1
|
25.0
|
1.0
|
|
HB2
|
A:SER435
|
4.1
|
26.4
|
1.0
|
|
ND1
|
C:HIS237
|
4.2
|
20.9
|
1.0
|
|
HD13
|
A:LEU377
|
4.4
|
27.5
|
1.0
|
|
HE1
|
A:MET439
|
4.4
|
28.1
|
1.0
|
|
HB3
|
A:ALA384
|
4.5
|
24.5
|
1.0
|
|
HE2
|
C:HIS238
|
4.5
|
25.7
|
1.0
|
|
H
|
A:ALA436
|
4.5
|
23.7
|
1.0
|
|
CA
|
A:SER435
|
4.5
|
20.7
|
1.0
|
|
H
|
A:MET439
|
4.5
|
25.4
|
1.0
|
|
HB2
|
A:ALA436
|
4.5
|
24.0
|
1.0
|
|
CD2
|
C:HIS237
|
4.5
|
21.2
|
1.0
|
|
HA
|
A:LEU377
|
4.6
|
26.0
|
1.0
|
|
HA
|
A:ALA380
|
4.6
|
27.4
|
1.0
|
|
SD
|
A:MET439
|
4.7
|
25.2
|
1.0
|
|
HG23
|
A:THR381
|
4.7
|
29.7
|
1.0
|
|
CG
|
C:HIS237
|
4.8
|
20.1
|
1.0
|
|
HD2
|
C:HIS238
|
4.8
|
26.8
|
1.0
|
|
HB
|
A:THR381
|
4.8
|
30.0
|
1.0
|
|
CA
|
A:MET439
|
4.8
|
20.5
|
1.0
|
|
HB2
|
A:ALA384
|
4.8
|
24.5
|
1.0
|
|
CB
|
A:ALA436
|
4.8
|
20.0
|
1.0
|
|
HG3
|
A:MET439
|
4.8
|
26.4
|
1.0
|
|
HG
|
A:LEU377
|
4.9
|
26.8
|
1.0
|
|
N
|
A:ALA380
|
4.9
|
22.3
|
1.0
|
|
C
|
A:THR381
|
4.9
|
22.6
|
1.0
|
|
HA
|
A:SER435
|
4.9
|
24.9
|
1.0
|
|
C
|
A:LEU377
|
5.0
|
21.9
|
1.0
|
|
Krypton binding site 7 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 7 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 7 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Kr607
b:43.0
occ:0.31
|
HD22
|
D:LEU77
|
2.9
|
36.4
|
1.0
|
|
HG12
|
A:VAL159
|
3.1
|
33.5
|
1.0
|
|
O
|
A:MET158
|
3.2
|
25.1
|
1.0
|
|
HA
|
A:HIS157
|
3.3
|
30.3
|
1.0
|
|
HB3
|
D:LEU77
|
3.5
|
30.6
|
1.0
|
|
HD13
|
D:LEU77
|
3.6
|
35.4
|
1.0
|
|
HE2
|
D:LYS42
|
3.6
|
31.7
|
1.0
|
|
HG13
|
A:VAL159
|
3.7
|
33.5
|
1.0
|
|
ND1
|
A:HIS157
|
3.7
|
29.9
|
1.0
|
|
HZ1
|
D:LYS42
|
3.8
|
34.0
|
1.0
|
|
C
|
A:HIS157
|
3.8
|
25.3
|
1.0
|
|
CD2
|
D:LEU77
|
3.8
|
30.3
|
1.0
|
|
C
|
A:MET158
|
3.8
|
25.1
|
1.0
|
|
HD1
|
A:HIS157
|
3.8
|
35.9
|
1.0
|
|
CE1
|
A:HIS157
|
3.8
|
30.2
|
1.0
|
|
CG1
|
A:VAL159
|
3.9
|
27.9
|
1.0
|
|
HE3
|
D:LYS42
|
3.9
|
31.7
|
1.0
|
|
CA
|
A:HIS157
|
4.0
|
25.3
|
1.0
|
|
O
|
D:HOH713
|
4.0
|
33.7
|
1.0
|
|
CG
|
A:HIS157
|
4.0
|
31.3
|
1.0
|
|
O
|
A:HIS157
|
4.1
|
27.9
|
1.0
|
|
N
|
A:MET158
|
4.1
|
25.5
|
1.0
|
|
HA
|
A:VAL159
|
4.1
|
28.1
|
1.0
|
|
HE1
|
A:HIS157
|
4.1
|
36.3
|
1.0
|
|
CE
|
D:LYS42
|
4.1
|
26.4
|
1.0
|
|
NE2
|
A:HIS157
|
4.2
|
29.4
|
1.0
|
|
O
|
D:HOH846
|
4.3
|
33.8
|
1.0
|
|
HD23
|
D:LEU77
|
4.3
|
36.4
|
1.0
|
|
H
|
A:MET158
|
4.3
|
30.6
|
1.0
|
|
NZ
|
D:LYS42
|
4.3
|
28.3
|
1.0
|
|
CB
|
D:LEU77
|
4.3
|
25.4
|
1.0
|
|
HD21
|
D:LEU77
|
4.3
|
36.4
|
1.0
|
|
CD2
|
A:HIS157
|
4.3
|
32.8
|
1.0
|
|
CD1
|
D:LEU77
|
4.3
|
29.4
|
1.0
|
|
CG
|
D:LEU77
|
4.4
|
30.8
|
1.0
|
|
N
|
A:VAL159
|
4.4
|
24.7
|
1.0
|
|
HG11
|
A:VAL159
|
4.5
|
33.5
|
1.0
|
|
HZ3
|
D:LYS42
|
4.5
|
34.0
|
1.0
|
|
CA
|
A:MET158
|
4.6
|
21.9
|
1.0
|
|
HA
|
D:LEU77
|
4.6
|
34.4
|
1.0
|
|
CB
|
A:HIS157
|
4.6
|
25.4
|
1.0
|
|
CA
|
A:VAL159
|
4.6
|
23.4
|
1.0
|
|
HD11
|
D:LEU77
|
4.8
|
35.4
|
1.0
|
|
HD2
|
A:HIS157
|
4.9
|
39.3
|
1.0
|
|
CB
|
A:VAL159
|
4.9
|
22.2
|
1.0
|
|
HD13
|
D:LEU72
|
4.9
|
30.1
|
1.0
|
|
HA3
|
D:GLY91
|
4.9
|
30.5
|
1.0
|
|
OD1
|
D:ASP92
|
5.0
|
28.3
|
1.0
|
|
HB2
|
D:LEU77
|
5.0
|
30.6
|
1.0
|
|
Krypton binding site 8 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 8 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 8 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Kr608
b:44.7
occ:0.27
|
HG3
|
A:LYS18
|
2.4
|
38.9
|
1.0
|
|
HB2
|
A:LYS81
|
3.0
|
24.6
|
1.0
|
|
HE2
|
A:LYS18
|
3.1
|
34.8
|
1.0
|
|
H
|
A:LYS81
|
3.1
|
26.6
|
1.0
|
|
CG
|
A:LYS18
|
3.3
|
32.4
|
1.0
|
|
HG23
|
A:ILE88
|
3.3
|
26.5
|
1.0
|
|
HD13
|
A:ILE88
|
3.4
|
32.1
|
1.0
|
|
HD3
|
A:LYS18
|
3.4
|
37.9
|
1.0
|
|
N
|
A:LYS81
|
3.5
|
22.1
|
1.0
|
|
HB1
|
A:ALA14
|
3.5
|
24.8
|
1.0
|
|
OD1
|
A:ASN349
|
3.5
|
21.0
|
1.0
|
|
HG12
|
A:ILE88
|
3.6
|
28.7
|
1.0
|
|
HG2
|
A:PRO79
|
3.6
|
29.5
|
1.0
|
|
CD
|
A:LYS18
|
3.7
|
31.6
|
1.0
|
|
HA
|
A:TYR80
|
3.7
|
23.3
|
1.0
|
|
HG2
|
A:LYS18
|
3.7
|
38.9
|
1.0
|
|
O
|
A:PRO79
|
3.8
|
21.1
|
1.0
|
|
CB
|
A:LYS81
|
3.8
|
20.5
|
1.0
|
|
HG21
|
A:ILE88
|
3.8
|
26.5
|
1.0
|
|
HB3
|
A:LYS81
|
3.8
|
24.6
|
1.0
|
|
CE
|
A:LYS18
|
3.8
|
28.9
|
1.0
|
|
O
|
A:ALA14
|
3.8
|
22.8
|
1.0
|
|
C
|
A:TYR80
|
3.9
|
22.2
|
1.0
|
|
CG2
|
A:ILE88
|
4.0
|
22.1
|
1.0
|
|
CD1
|
A:ILE88
|
4.1
|
26.7
|
1.0
|
|
CA
|
A:TYR80
|
4.1
|
19.4
|
1.0
|
|
C
|
A:PRO79
|
4.2
|
21.6
|
1.0
|
|
CA
|
A:LYS81
|
4.2
|
20.7
|
1.0
|
|
HB2
|
A:LYS18
|
4.2
|
38.2
|
1.0
|
|
HD11
|
A:ILE88
|
4.2
|
32.1
|
1.0
|
|
HA
|
A:ALA14
|
4.2
|
25.8
|
1.0
|
|
CG1
|
A:ILE88
|
4.2
|
23.9
|
1.0
|
|
CB
|
A:LYS18
|
4.3
|
31.8
|
1.0
|
|
N
|
A:TYR80
|
4.3
|
19.2
|
1.0
|
|
CB
|
A:ALA14
|
4.3
|
20.7
|
1.0
|
|
HB2
|
A:SER17
|
4.4
|
31.5
|
1.0
|
|
HE3
|
A:LYS18
|
4.4
|
34.8
|
1.0
|
|
HA
|
A:LYS81
|
4.4
|
24.9
|
1.0
|
|
CG
|
A:ASN349
|
4.5
|
21.5
|
1.0
|
|
CG
|
A:PRO79
|
4.6
|
24.5
|
1.0
|
|
C
|
A:ALA14
|
4.6
|
22.5
|
1.0
|
|
CA
|
A:ALA14
|
4.6
|
21.5
|
1.0
|
|
HA
|
A:LYS18
|
4.6
|
31.6
|
1.0
|
|
HD2
|
A:LYS18
|
4.6
|
37.9
|
1.0
|
|
H
|
A:LYS18
|
4.7
|
30.6
|
1.0
|
|
CB
|
A:ILE88
|
4.7
|
19.1
|
1.0
|
|
HB2
|
A:ALA14
|
4.7
|
24.8
|
1.0
|
|
HD21
|
A:ASN349
|
4.7
|
25.3
|
1.0
|
|
HZ3
|
A:LYS18
|
4.7
|
33.0
|
1.0
|
|
N
|
A:LYS18
|
4.7
|
25.5
|
1.0
|
|
HB2
|
A:PRO79
|
4.7
|
25.2
|
1.0
|
|
O
|
A:TYR80
|
4.7
|
19.6
|
1.0
|
|
HG22
|
A:ILE88
|
4.8
|
26.5
|
1.0
|
|
H
|
A:TYR80
|
4.8
|
23.0
|
1.0
|
|
CA
|
A:LYS18
|
4.8
|
26.3
|
1.0
|
|
NZ
|
A:LYS18
|
4.8
|
27.5
|
1.0
|
|
HB3
|
A:SER17
|
4.9
|
31.5
|
1.0
|
|
O
|
A:HOH860
|
4.9
|
21.7
|
1.0
|
|
HD2
|
A:PRO79
|
4.9
|
28.1
|
1.0
|
|
HD2
|
A:LYS81
|
4.9
|
26.8
|
1.0
|
|
HA
|
A:ILE88
|
4.9
|
25.5
|
1.0
|
|
HD12
|
A:ILE88
|
4.9
|
32.1
|
1.0
|
|
ND2
|
A:ASN349
|
5.0
|
21.1
|
1.0
|
|
Krypton binding site 9 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 9 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 9 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Kr501
b:36.1
occ:0.77
|
HE2
|
B:PHE417
|
3.1
|
33.0
|
1.0
|
|
HB2
|
B:ALA44
|
3.3
|
33.1
|
1.0
|
|
HG22
|
B:VAL413
|
3.3
|
34.1
|
1.0
|
|
HA
|
B:SER174
|
3.4
|
30.3
|
1.0
|
|
HB3
|
B:ALA44
|
3.5
|
33.1
|
1.0
|
|
HG13
|
B:VAL175
|
3.5
|
33.9
|
1.0
|
|
H
|
B:ALA44
|
3.6
|
32.4
|
1.0
|
|
O
|
B:LEU173
|
3.6
|
27.5
|
1.0
|
|
HG21
|
B:THR416
|
3.7
|
38.2
|
1.0
|
|
HA
|
B:VAL413
|
3.8
|
32.6
|
1.0
|
|
CB
|
B:ALA44
|
3.8
|
27.6
|
1.0
|
|
HA
|
B:VAL43
|
3.8
|
28.1
|
1.0
|
|
H
|
B:VAL175
|
3.9
|
29.0
|
1.0
|
|
N
|
B:ALA44
|
3.9
|
26.9
|
1.0
|
|
CE2
|
B:PHE417
|
4.0
|
27.5
|
1.0
|
|
C
|
B:LEU173
|
4.0
|
29.2
|
1.0
|
|
CA
|
B:SER174
|
4.0
|
25.2
|
1.0
|
|
HB3
|
B:LEU173
|
4.0
|
38.0
|
1.0
|
|
HB2
|
B:LEU173
|
4.0
|
38.0
|
1.0
|
|
N
|
B:VAL175
|
4.1
|
24.2
|
1.0
|
|
C
|
B:SER174
|
4.1
|
26.6
|
1.0
|
|
HG23
|
B:ILE412
|
4.1
|
41.7
|
1.0
|
|
N
|
B:SER174
|
4.1
|
27.8
|
1.0
|
|
HG12
|
B:VAL175
|
4.2
|
33.9
|
1.0
|
|
HB
|
B:THR416
|
4.2
|
33.9
|
1.0
|
|
CG2
|
B:VAL413
|
4.3
|
28.4
|
1.0
|
|
CG1
|
B:VAL175
|
4.3
|
28.2
|
1.0
|
|
HZ
|
B:PHE417
|
4.4
|
31.7
|
1.0
|
|
C
|
B:VAL43
|
4.4
|
23.4
|
1.0
|
|
HG13
|
B:VAL413
|
4.4
|
30.2
|
1.0
|
|
OG1
|
B:THR416
|
4.4
|
29.6
|
1.0
|
|
CB
|
B:LEU173
|
4.5
|
31.6
|
1.0
|
|
CA
|
B:ALA44
|
4.5
|
25.5
|
1.0
|
|
HG23
|
B:VAL413
|
4.5
|
34.1
|
1.0
|
|
HG1
|
B:THR416
|
4.5
|
35.5
|
1.0
|
|
CG2
|
B:THR416
|
4.5
|
31.8
|
1.0
|
|
O
|
B:HOH724
|
4.5
|
22.1
|
1.0
|
|
CA
|
B:VAL43
|
4.6
|
23.4
|
1.0
|
|
CZ
|
B:PHE417
|
4.6
|
26.4
|
1.0
|
|
CB
|
B:THR416
|
4.6
|
28.2
|
1.0
|
|
HB1
|
B:ALA44
|
4.6
|
33.1
|
1.0
|
|
CA
|
B:VAL413
|
4.6
|
27.2
|
1.0
|
|
H
|
B:SER174
|
4.7
|
33.3
|
1.0
|
|
O
|
B:SER174
|
4.7
|
25.2
|
1.0
|
|
HG21
|
B:VAL413
|
4.8
|
34.1
|
1.0
|
|
HG11
|
B:VAL175
|
4.8
|
33.9
|
1.0
|
|
HD2
|
B:PHE417
|
4.8
|
32.3
|
1.0
|
|
HG22
|
B:THR42
|
4.9
|
33.3
|
1.0
|
|
CD2
|
B:PHE417
|
4.9
|
26.9
|
1.0
|
|
CA
|
B:LEU173
|
4.9
|
28.1
|
1.0
|
|
CB
|
B:VAL413
|
4.9
|
25.9
|
1.0
|
|
O
|
B:THR42
|
4.9
|
26.7
|
1.0
|
|
HA
|
B:VAL175
|
5.0
|
30.2
|
1.0
|
|
HG22
|
B:THR416
|
5.0
|
38.2
|
1.0
|
|
Krypton binding site 10 out
of 38 in 9qm5
Go back to
Krypton Binding Sites List in 9qm5
Krypton binding site 10 out
of 38 in the Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
 Mono view
 Stereo pair view
|
|
A full contact list of Krypton with other atoms in the Kr binding
site number 10 of Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Kr301
b:31.2
occ:0.35
|
HD21
|
C:LEU200
|
2.8
|
36.0
|
1.0
|
|
HG11
|
C:VAL198
|
2.9
|
37.4
|
1.0
|
|
HB2
|
C:ALA40
|
3.1
|
28.5
|
1.0
|
|
HB3
|
C:ALA40
|
3.2
|
28.5
|
1.0
|
|
HD13
|
C:ILE139
|
3.2
|
32.8
|
1.0
|
|
HG11
|
C:VAL32
|
3.4
|
37.4
|
1.0
|
|
CB
|
C:ALA40
|
3.4
|
23.8
|
1.0
|
|
HB1
|
C:ALA40
|
3.4
|
28.5
|
1.0
|
|
HA
|
C:LEU37
|
3.4
|
31.4
|
1.0
|
|
HD11
|
C:ILE139
|
3.5
|
32.8
|
1.0
|
|
HD12
|
C:LEU151
|
3.6
|
33.7
|
1.0
|
|
HD12
|
C:LEU37
|
3.6
|
35.8
|
1.0
|
|
CD2
|
C:LEU200
|
3.7
|
30.0
|
1.0
|
|
CD1
|
C:ILE139
|
3.8
|
27.3
|
1.0
|
|
CG1
|
C:VAL198
|
3.8
|
31.2
|
1.0
|
|
HD11
|
C:LEU151
|
3.9
|
33.7
|
1.0
|
|
OE1
|
C:GLU185
|
3.9
|
27.0
|
1.0
|
|
HD13
|
C:LEU37
|
3.9
|
35.8
|
1.0
|
|
HD11
|
C:LEU200
|
4.0
|
34.6
|
1.0
|
|
HG13
|
C:VAL32
|
4.0
|
37.4
|
1.0
|
|
HD12
|
C:ILE139
|
4.0
|
32.8
|
1.0
|
|
HD22
|
C:LEU200
|
4.0
|
36.0
|
1.0
|
|
HG12
|
C:VAL198
|
4.1
|
37.4
|
1.0
|
|
HD23
|
C:LEU200
|
4.1
|
36.0
|
1.0
|
|
CG1
|
C:VAL32
|
4.1
|
31.1
|
1.0
|
|
CD1
|
C:LEU151
|
4.2
|
28.1
|
1.0
|
|
CD1
|
C:LEU37
|
4.2
|
29.8
|
1.0
|
|
HG21
|
C:VAL198
|
4.3
|
37.0
|
1.0
|
|
HG13
|
C:VAL198
|
4.3
|
37.4
|
1.0
|
|
O
|
C:ASP36
|
4.4
|
25.7
|
1.0
|
|
CA
|
C:LEU37
|
4.4
|
26.1
|
1.0
|
|
HG21
|
C:VAL32
|
4.4
|
38.7
|
1.0
|
|
HB3
|
C:ASP36
|
4.6
|
35.5
|
1.0
|
|
CD
|
C:GLU185
|
4.6
|
31.5
|
1.0
|
|
HB
|
C:VAL198
|
4.6
|
34.1
|
1.0
|
|
HB3
|
C:GLU185
|
4.6
|
29.0
|
1.0
|
|
HD13
|
C:LEU151
|
4.6
|
33.7
|
1.0
|
|
HG12
|
C:VAL32
|
4.6
|
37.4
|
1.0
|
|
CG
|
C:LEU200
|
4.7
|
28.7
|
1.0
|
|
CD1
|
C:LEU200
|
4.7
|
28.8
|
1.0
|
|
HG
|
C:LEU200
|
4.7
|
34.5
|
1.0
|
|
CB
|
C:VAL198
|
4.7
|
28.4
|
1.0
|
|
C
|
C:ASP36
|
4.8
|
27.6
|
1.0
|
|
HD11
|
C:LEU37
|
4.8
|
35.8
|
1.0
|
|
N
|
C:LEU37
|
4.8
|
25.7
|
1.0
|
|
HB2
|
C:LEU37
|
4.8
|
32.1
|
1.0
|
|
H
|
C:ALA40
|
4.9
|
26.7
|
1.0
|
|
CA
|
C:ALA40
|
4.9
|
24.7
|
1.0
|
|
HG21
|
C:ILE139
|
4.9
|
29.1
|
1.0
|
|
HG22
|
C:VAL32
|
4.9
|
38.7
|
1.0
|
|
HD13
|
C:LEU200
|
5.0
|
34.6
|
1.0
|
|
CG2
|
C:VAL198
|
5.0
|
30.8
|
1.0
|
|
Reference:
M.-C.Mueller,
M.Wissink,
P.Mukherjee,
N.Von Possel,
R.Laso-Perez,
S.Engilberge,
P.Carpentier,
J.Kahnt,
G.Wegener,
C.U.Welte,
T.Wagner.
Atomic Resolution Structures of Key Enzyme Mcr in Anaerobic Methanotrophy Reveal Novel and Extensive Post-Translational Modifications. To Be Published.
Page generated: Sat Aug 9 19:48:49 2025
|
